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 cross-spectral factor analysis



Reviews: Cross-Spectral Factor Analysis

Neural Information Processing Systems

The authors propose a factor analysis method called CSFA for modelling LFP data, which is a generative model with the specific assumption that factors, called Elecotomes, are sampled from Gaussian processes with cross-spectral mixture kernel. The generative model is straightforward use of CSM, and the estimation is apparently also a known form (resilient back prop; I never heard of it before). I do like the dCSFA formulation. The proposed method focuses on spectral power and phase relationship across regions, and is claimed to bring both better interpretability and higher predictive power. They also extend CSFA to be discriminative to side information such as genetic and behavioral data by incorporating logistic loss (or the likes of it).


Cross-Spectral Factor Analysis

Neil Gallagher, Kyle R. Ulrich, Austin Talbot, Kafui Dzirasa, Lawrence Carin, David E. Carlson

Neural Information Processing Systems

In neuropsychiatric disorders such as schizophrenia or depression, there is often a disruption in the way that regions of the brain synchronize with one another. To facilitate understanding of network-level synchronization between brain regions, we introduce a novel model of multisite low-frequency neural recordings, such as local field potentials (LFPs) and electroencephalograms (EEGs). The proposed model, named Cross-Spectral Factor Analysis (CSFA), breaks the observed signal into factors defined by unique spatio-spectral properties. These properties are granted to the factors via a Gaussian process formulation in a multiple kernel learning framework. In this way, the LFP signals can be mapped to a lower dimensional space in a way that retains information of relevance to neuroscientists. Critically, the factors are interpretable. The proposed approach empirically allows similar performance in classifying mouse genotype and behavioral context when compared to commonly used approaches that lack the interpretability of CSFA. We also introduce a semi-supervised approach, termed discriminative CSFA (dCSFA). CSFA and dCSFA provide useful tools for understanding neural dynamics, particularly by aiding in the design of causal follow-up experiments.


Cross-Spectral Factor Analysis

Gallagher, Neil, Ulrich, Kyle R., Talbot, Austin, Dzirasa, Kafui, Carin, Lawrence, Carlson, David E.

Neural Information Processing Systems

In neuropsychiatric disorders such as schizophrenia or depression, there is often a disruption in the way that regions of the brain synchronize with one another. To facilitate understanding of network-level synchronization between brain regions, we introduce a novel model of multisite low-frequency neural recordings, such as local field potentials (LFPs) and electroencephalograms (EEGs). The proposed model, named Cross-Spectral Factor Analysis (CSFA), breaks the observed signal into factors defined by unique spatio-spectral properties. These properties are granted to the factors via a Gaussian process formulation in a multiple kernel learning framework. In this way, the LFP signals can be mapped to a lower dimensional space in a way that retains information of relevance to neuroscientists. Critically, the factors are interpretable. The proposed approach empirically allows similar performance in classifying mouse genotype and behavioral context when compared to commonly used approaches that lack the interpretability of CSFA. We also introduce a semi-supervised approach, termed discriminative CSFA (dCSFA). CSFA and dCSFA provide useful tools for understanding neural dynamics, particularly by aiding in the design of causal follow-up experiments.